Dr Cherry Lim
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Cherry Lim
Wellcome Early-Career Research Fellow
Cherry Lim is based at the University of Oxford and the Mahidol-Oxford Tropical Medicine Research Unit, Thailand. Cherry currently holds a Wellcome Early Career Award. The goal of Cherry's Wellcome-funded project is to develop a framework to inform Antimicrobial Stewardship (AMS) and Infection Prevention and Control (IPC) guidelines for settings with a high burden of antibiotic resistance. Cherry will be generating multi-species bacterial genomic data and linking them to clinical, microbial phenotype, treatment, and outcome data on hospital-acquired infections. She will also combine probabilistic bacterial transmission and causal models, and use passive surveillance data to quantify the expected impacts of implementing different guidelines.
Previously, Cherry worked as a postdoctoral researcher in Ben Cooper’s DRIaDD group based in Oxford. Her work used causal inference to help quantify the burden of antimicrobial-resistant infections. This involved applying a counterfactual framework to analyse the relationship between antibiotic-resistant infections and patient mortality using longitudinal data.
Other projects that Cherry was involved in included assessing the cost-effectiveness of an enhanced surveillance system in Timor-Leste, evaluating the impact of empirical antibiotic use on patient survival to inform antibiotic use policy (the Wellcome-funded ADILA project), and a collaborative project with Direk Limmathurotsakul on developing tools for an antimicrobial resistance surveillance system.
She completed a DPhil in 2022 on projects focusing on hospital-acquired drug-resistant bacterial infections and antimicrobial resistance surveillance systems in Southeast Asia. Here is her career story on the Wellcome’s Research Careers examples page.
Recent publications
Prospects and perils of antimicrobial resistance cluster detection using routinely collected data: an illustration from tertiary hospitals in Thailand representing different data contexts
Journal article
Rangsiwutisak C. et al, (2026), Journal of Hospital Infection, 170, 48 - 59
Effectiveness of amoxicillin and amoxicillin-clavulanate for the treatment of community-acquired pneumonia in adults and children: systematic review and meta-analysis
Preprint
Potter-Schwartz L. et al, (2025)
Epidemiology and excess mortality of antimicrobial resistance in bacteraemias among cancer patients: a cohort study using routinely collected health data from regional hospital trusts in Oxford and Oslo, 2008–2018
Journal article
Danielsen AS. et al, (2025), BMJ Open, 15, e092740 - e092740